Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin 1 | SAMEA3710568_02180 | Not Available | Negative | 2122073 - 2122402 | 11807.2 |
| atp-dependent rna helicase rhlb | SAMEA3710568_02181 | Not Available | Positive | 2122533 - 2123798 | 47128.7 |
| guanosine pentaphosphate phosphohydrolase | SAMEA3710568_02182 | Not Available | Positive | 2123932 - 2125416 | 54945.5 |
| atp-dependent dna helicase rep | SAMEA3710568_02183 | Not Available | Negative | 2125463 - 2127484 | 77070.6 |
| peptidyl-prolyl cis-trans isomerase c | SAMEA3710568_02184 | Not Available | Positive | 2127571 - 2127852 | 10260.7 |
| ketol-acid reductoisomerase | SAMEA3710568_02185 | Not Available | Negative | 2127898 - 2129373 | 54100.2 |
| ilvc positive regulator | SAMEA3710568_02186 | Not Available | Positive | 2129523 - 2130413 | 33179.4 |
| threonine dehydratase | SAMEA3710568_02187 | Not Available | Negative | 2130410 - 2131954 | 56187.4 |
| dihydroxy-acid dehydratase | SAMEA3710568_02188 | Not Available | Negative | 2131957 - 2133807 | 65482.3 |
| branched-chain amino acid aminotransferase | SAMEA3710568_02189 | Not Available | Negative | 2133872 - 2134801 | 34109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





