Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tdp-4-oxo-6-deoxy-d-glucose transaminase | SAMEA3710568_02170 | Not Available | Negative | 2111887 - 2113017 | 41933.4 |
| lipopolysaccharide biosynthesis protein rffc | SAMEA3710568_02171 | Not Available | Negative | 2113022 - 2113696 | 24209.7 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3710568_02172 | Not Available | Negative | 2113674 - 2114555 | 32736.3 |
| dtdp-glucose 4,6-dehydratase | SAMEA3710568_02173 | Not Available | Negative | 2114574 - 2115641 | 39812.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SAMEA3710568_02174 | Not Available | Negative | 2115641 - 2116903 | 45841.3 |
| udp-n-acetyl glucosamine -2-epimerase | SAMEA3710568_02175 | Not Available | Negative | 2116900 - 2118030 | 42132.0 |
| lipopolysaccharide biosynthesis protein wzze | SAMEA3710568_02176 | Not Available | Negative | 2118086 - 2119132 | 39491.3 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphatetransferase | SAMEA3710568_02177 | Not Available | Negative | 2119144 - 2120247 | 40959.7 |
| uncharacterised protein | SAMEA3710568_02178 | Not Available | Negative | 2120259 - 2120477 | 8260.38 |
| transcription termination factor rho | SAMEA3710568_02179 | Not Available | Negative | 2120487 - 2121746 | 47007.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





