Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase-activating protein aslb | SAMEA3710568_02160 | Not Available | Negative | 2103970 - 2105205 | 46561.8 |
| Trna-pro | Not Available | Not Available | Positive | 2105352 - 2105428 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2105471 - 2105557 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2105578 - 2105653 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2105712 - 2105788 | Not Available |
| putative transport protein yifk | SAMEA3710568_02165 | Not Available | Negative | 2105891 - 2107276 | 50341.9 |
| putative udp-n-acetyl-d-mannosaminuronic acid transferase | SAMEA3710568_02166 | Not Available | Negative | 2107467 - 2108207 | 27977.9 |
| putative common antigen polymerase | SAMEA3710568_02167 | Not Available | Negative | 2108210 - 2109562 | 51552.2 |
| 4-alpha-l-fucosyltransferase | SAMEA3710568_02168 | Not Available | Negative | 2109559 - 2110638 | 40516.6 |
| polysaccharide biosynthesis protein | SAMEA3710568_02169 | Not Available | Negative | 2110635 - 2111885 | 44962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





