Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group 4 capsule (g4c) polysaccharide, lipoprotein ymca | SAMEA3710568_02139 | Not Available | Negative | 2083988 - 2086084 | 78742.3 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3710568_02140 | Not Available | Negative | 2086084 - 2086830 | 27327.7 |
| group 4 capsule (g4c) polysaccharide, lipoprotein ymcc | SAMEA3710568_02141 | Not Available | Negative | 2086827 - 2087471 | 24156.9 |
| putative inner membrane protein | SAMEA3710568_02142 | Not Available | Negative | 2087578 - 2087883 | 9478.0 |
| cold shock dna-binding protein | SAMEA3710568_02143 | Not Available | Negative | 2088325 - 2088537 | 7720.48 |
| gnsa/gnsb family transcriptional regulator | SAMEA3710568_02145 | Not Available | Positive | 2090205 - 2090378 | 6588.05 |
| 4fe-4s binding protein | SAMEA3710568_02146 | Not Available | Negative | 2090427 - 2091500 | 40069.4 |
| hybrid sensory histidine kinase tors | SAMEA3710568_02147 | Not Available | Negative | 2091602 - 2094031 | 89013.5 |
| sensor protein tors | SAMEA3710568_02148 | Not Available | Negative | 2094050 - 2094268 | 8122.77 |
| tmao reductase system periplasmic protein tort | SAMEA3710568_02149 | Not Available | Positive | 2094396 - 2095424 | 37986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





