Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese transport regulator mntr | SAMEA3710568_02099 | Not Available | Negative | 2047191 - 2047658 | 17653.4 |
| uncharacterised protein | SAMEA3710568_02100 | Not Available | Positive | 2047844 - 2047972 | 5031.31 |
| sulfatase family protein | SAMEA3710568_02101 | Not Available | Positive | 2048244 - 2049827 | 59651.3 |
| outer membrane protein x | SAMEA3710568_02102 | Not Available | Negative | 2049875 - 2050390 | 18603.6 |
| threonine and homoserine efflux system | SAMEA3710568_02103 | Not Available | Positive | 2050743 - 2051630 | 31228.5 |
| global regulator, starvation conditions | SAMEA3710568_02104 | Not Available | Positive | 2051929 - 2052432 | 18696.3 |
| glutamine abc transporter periplasmic protein | SAMEA3710568_02105 | Not Available | Positive | 2052836 - 2053582 | 27221.6 |
| glutamine abc transporter permease | SAMEA3710568_02106 | Not Available | Positive | 2053721 - 2054380 | 24365.8 |
| glutamine abc transporter atp-binding protein | SAMEA3710568_02107 | Not Available | Positive | 2054377 - 2055099 | 26660.6 |
| putative mechanosensitive channel protein | SAMEA3710568_02108 | Not Available | Positive | 2055360 - 2055554 | 7237.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





