Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm formation regulatory protein bssr | SAMEA3710568_02079 | Not Available | Negative | 2022115 - 2022498 | 14536.6 |
| ribosomal protein s12 methylthiotransferase | SAMEA3710568_02080 | Not Available | Positive | 2022711 - 2024036 | 49615.7 |
| putative membrane protein ylif | SAMEA3710568_02081 | Not Available | Negative | 2024083 - 2025411 | 49933.9 |
| putative cyclic diguanylate phosphodiesterase (eal) domain | SAMEA3710568_02082 | Not Available | Negative | 2025419 - 2025844 | 16003.3 |
| diguanylate phosphodiesterase | SAMEA3710568_02083 | Not Available | Negative | 2025956 - 2027761 | 69193.7 |
| glutathione abc transporter permease gsid | SAMEA3710568_02084 | Not Available | Negative | 2027939 - 2028850 | 33282.3 |
| glutathione abc transporter permease gsic | SAMEA3710568_02085 | Not Available | Negative | 2028853 - 2029773 | 34151.6 |
| transport protein | SAMEA3710568_02086 | Not Available | Negative | 2029791 - 2031329 | 56505.1 |
| glutathione transporter atp-binding protein | SAMEA3710568_02087 | Not Available | Negative | 2031349 - 2033220 | 69090.2 |
| l-asparaginase | SAMEA3710568_02088 | Not Available | Negative | 2033207 - 2034172 | 33387.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





