Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux system protein mdti | SAMEA3710568_02059 | Not Available | Positive | 2003332 - 2003661 | 11748.9 |
| peptidase, s1a (chymotrypsin) family | SAMEA3710568_02060 | Not Available | Negative | 2003700 - 2004521 | 29266.6 |
| acid shock protein | SAMEA3710568_02061 | Not Available | Negative | 2004797 - 2005105 | 10460.6 |
| major facilitator superfamily protein | SAMEA3710568_02062 | Not Available | Negative | 2005529 - 2005894 | 13169.4 |
| major facilitator superfamily protein | SAMEA3710568_02063 | Not Available | Negative | 2005973 - 2006782 | 29227.4 |
| putative lysr-type transcriptional regulator | SAMEA3710568_02064 | Not Available | Positive | 2006889 - 2007818 | 34549.9 |
| transcriptional regulator mic | SAMEA3710568_02065 | Not Available | Positive | 2007953 - 2009173 | 44387.0 |
| putative dithiobiotin synthetase | SAMEA3710568_02066 | Not Available | Positive | 2009298 - 2009993 | 25023.5 |
| voltage-gated clc-type chloride channel clcb | SAMEA3710568_02067 | Not Available | Negative | 2009946 - 2011202 | 44252.1 |
| twin-argninine leader-binding protein dmsd | SAMEA3710568_02068 | Not Available | Negative | 2011397 - 2012011 | 23345.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





