Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine transporter tcyp | SAMEA3710568_02049 | Not Available | Negative | 1992036 - 1993355 | 46193.0 |
| response transcriptional regulatory protein | SAMEA3710568_02050 | Not Available | Negative | 1993580 - 1994323 | 27581.2 |
| glpm family protein | SAMEA3710568_02051 | Not Available | Positive | 1994452 - 1994787 | 12323.8 |
| short chain dehydrogenase | SAMEA3710568_02052 | Not Available | Negative | 1994784 - 1995506 | 26331.8 |
| arginine/ornithine antiporter | SAMEA3710568_02053 | Not Available | Negative | 1995543 - 1996925 | 49504.5 |
| ydgh protein | SAMEA3710568_02054 | Not Available | Negative | 1997111 - 1998055 | 33874.0 |
| pyridine nucleotide transhydrogenase, alpha subunit | SAMEA3710568_02055 | Not Available | Positive | 1998579 - 2000111 | 54592.6 |
| pyridine nucleotide transhydrogenase | SAMEA3710568_02056 | Not Available | Positive | 2000122 - 2001510 | 48726.0 |
| putative transport protein | SAMEA3710568_02057 | Not Available | Negative | 2001535 - 2002569 | 37545.3 |
| multidrug efflux system protein mdtj | SAMEA3710568_02058 | Not Available | Positive | 2002980 - 2003345 | 13115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





