Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3710568_02027 | Not Available | Negative | 1968153 - 1970249 | 78503.1 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3710568_02028 | Not Available | Negative | 1970249 - 1970986 | 26279.2 |
| group 4 capsule (g4c) polysaccharide, lipoprotein ymcc | SAMEA3710568_02029 | Not Available | Negative | 1970983 - 1971621 | 23786.2 |
| exopolysaccharide production protein yjbe | SAMEA3710568_02030 | Not Available | Negative | 1971735 - 1971977 | 7458.52 |
| glucose-6-phosphate isomerase | SAMEA3710568_02032 | Not Available | Negative | 1972440 - 1974089 | 61549.1 |
| aspartate kinase iii | SAMEA3710568_02034 | Not Available | Positive | 1974614 - 1975963 | 48520.6 |
| issfl3 orfc,d | SAMEA3710568_02035 | Not Available | Negative | 1976129 - 1976746 | 23848.1 |
| is600 orf1 | SAMEA3710568_02036 | Not Available | Negative | 1976782 - 1977084 | 11194.4 |
| transcriptional regulator uidr | SAMEA3710568_02037 | Not Available | Positive | 1978149 - 1978727 | 21308.9 |
| beta-d-glucuronidase | SAMEA3710568_02038 | Not Available | Positive | 1979115 - 1980818 | 64307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





