Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 93628 - 93703 | Not Available |
| glutamyl-trna synthetase | SAMEA3710568_00098 | Not Available | Positive | 93962 - 95377 | 53818.6 |
| dna-binding transcriptional regulator | SAMEA3710568_00099 | Not Available | Negative | 95429 - 95800 | 13971.7 |
| dna-binding transcriptional regulator | SAMEA3710568_00100 | Not Available | Negative | 95823 - 96182 | 13412.3 |
| Trna-ala | Not Available | Not Available | Positive | 96403 - 96478 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 96518 - 96593 | Not Available |
| diguanylate cyclase | SAMEA3710568_00103 | Not Available | Positive | 96801 - 97427 | 23876.2 |
| cytochrome c-type biogenesis protein | SAMEA3710568_00104 | Not Available | Positive | 97396 - 98913 | 57705.5 |
| nucleoside transporter nupc | SAMEA3710568_00105 | Not Available | Negative | 98963 - 100165 | 43506.5 |
| manganese transport protein mnth | SAMEA3710568_00106 | Not Available | Positive | 100501 - 101739 | 44224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





