Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe(2+)-trafficking protein | SAMEA3710568_01967 | Not Available | Negative | 1908636 - 1908911 | 10953.2 |
| adenine dna glycosylase | SAMEA3710568_01968 | Not Available | Negative | 1908939 - 1909991 | 39187.2 |
| trna (guanine-n(7)-)-methyltransferase | SAMEA3710568_01969 | Not Available | Positive | 1910152 - 1910871 | 27308.9 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_01970 | Not Available | Positive | 1910871 - 1911197 | 12840.2 |
| protein of uncharacterised function (duf2884) | SAMEA3710568_01971 | Not Available | Positive | 1911381 - 1912100 | 26416.8 |
| l-asparaginase ii | SAMEA3710568_01972 | Not Available | Positive | 1912276 - 1913322 | 36807.6 |
| alpha helix chain | SAMEA3710568_01973 | Not Available | Positive | 1913439 - 1914401 | 36608.1 |
| integral membrane protein | SAMEA3710568_01974 | Not Available | Negative | 1914502 - 1915803 | 45804.5 |
| is1 orf2 | SAMEA3710568_01975 | Not Available | Positive | 1916335 - 1916544 | 8338.2 |
| putative small integral c4-dicarboxylate membrane transport protein dctq | SAMEA3710568_01976 | Not Available | Negative | 1916567 - 1917070 | 18336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





