Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative plasmid transfer protein | SAMEA3710568_01957 | Not Available | Negative | 1895026 - 1895826 | 28692.4 |
| uncharacterised protein | SAMEA3710568_01958 | Not Available | Negative | 1896981 - 1897088 | 4128.78 |
| putative superfamily i dna helicase | SAMEA3710568_01959 | Not Available | Negative | 1897136 - 1900651 | 131468.0 |
| uncharacterised protein | SAMEA3710568_01960 | Not Available | Negative | 1900791 - 1900943 | 5884.3 |
| site-specific recombinase, phage integrase family protein | SAMEA3710568_01961 | Not Available | Negative | 1901104 - 1902366 | 47861.0 |
| Trna-phe | Not Available | Not Available | Positive | 1902564 - 1902639 | Not Available |
| na+ channel or pump | SAMEA3710568_01963 | Not Available | Negative | 1902745 - 1903452 | 24627.5 |
| ornithine decarboxylase isozyme | SAMEA3710568_01964 | Not Available | Positive | 1903850 - 1905985 | 79517.6 |
| protein nupg | SAMEA3710568_01965 | Not Available | Negative | 1906034 - 1907290 | 46392.0 |
| murein transglycosylase c | SAMEA3710568_01966 | Not Available | Negative | 1907492 - 1908571 | 40091.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





