Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | SAMEA3710568_01941 | Not Available | Positive | 1880375 - 1881103 | 27350.1 |
| pyridoxine 5'-phosphate synthase | SAMEA3710568_01942 | Not Available | Positive | 1881115 - 1881846 | 26409.9 |
| 4'-phosphopantetheinyl transferase | SAMEA3710568_01943 | Not Available | Positive | 1881846 - 1882226 | 14095.2 |
| 4fe-4s binding protein | SAMEA3710568_01944 | Not Available | Negative | 1882920 - 1883105 | 7039.34 |
| uncharacterised protein | SAMEA3710568_01945 | Not Available | Positive | 1883395 - 1883796 | 14695.8 |
| putative transposase | SAMEA3710568_01952 | Not Available | Negative | 1888163 - 1888711 | 20074.9 |
| putative transposase | SAMEA3710568_01953 | Not Available | Negative | 1888798 - 1889304 | 19262.4 |
| protein encoded within is | SAMEA3710568_01954 | Not Available | Positive | 1889370 - 1889777 | 15015.9 |
| uncharacterised protein | SAMEA3710568_01955 | Not Available | Negative | 1890180 - 1890761 | 22323.4 |
| serine protease eata | SAMEA3710568_01956 | Not Available | Negative | 1890808 - 1894665 | 139683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





