Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enzyme | SAMEA3710568_01930 | Not Available | Positive | 1870080 - 1870817 | 27209.4 |
| l-aspartate oxidase | SAMEA3710568_01931 | Not Available | Negative | 1870802 - 1871353 | 21281.5 |
| l-aspartate oxidase | SAMEA3710568_01932 | Not Available | Negative | 1871363 - 1872424 | 38624.8 |
| rna polymerase sigma factor rpoe | SAMEA3710568_01933 | Not Available | Positive | 1872832 - 1873407 | 21697.0 |
| anti-rna polymerase sigma factor sige | SAMEA3710568_01934 | Not Available | Positive | 1873440 - 1874090 | 24312.8 |
| periplasmic negative regulator of sigmae | SAMEA3710568_01935 | Not Available | Positive | 1874090 - 1875046 | 35751.8 |
| soxr reducing system protein rsec | SAMEA3710568_01936 | Not Available | Positive | 1875043 - 1875522 | 16626.3 |
| gtp-binding protein lepa | SAMEA3710568_01937 | Not Available | Positive | 1875720 - 1877519 | 66574.1 |
| signal peptidase i | SAMEA3710568_01938 | Not Available | Positive | 1877535 - 1878509 | 35948.3 |
| gtp-binding protein era | SAMEA3710568_01940 | Not Available | Positive | 1879458 - 1880363 | 33752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





