Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine synthase | SAMEA3710568_01920 | Not Available | Negative | 1858936 - 1860291 | 52823.9 |
| gnat family acetyltransferase | SAMEA3710568_01921 | Not Available | Negative | 1860405 - 1863065 | 97993.1 |
| dtw domain protein | SAMEA3710568_01922 | Not Available | Negative | 1863097 - 1863795 | 25924.4 |
| thioredoxin 2 | SAMEA3710568_01923 | Not Available | Negative | 1863864 - 1864283 | 15555.6 |
| putative methyltransferase | SAMEA3710568_01924 | Not Available | Positive | 1864490 - 1865527 | 37828.6 |
| uracil-dna glycosylase | SAMEA3710568_01925 | Not Available | Negative | 1865575 - 1866264 | 25710.7 |
| autonomous glycyl radical cofactor grca | SAMEA3710568_01926 | Not Available | Positive | 1866569 - 1866952 | 14241.0 |
| neutral amino-acid efflux protein | SAMEA3710568_01927 | Not Available | Negative | 1867008 - 1867595 | 21261.6 |
| lysr family transcriptional regulator | SAMEA3710568_01928 | Not Available | Positive | 1867698 - 1868579 | 33348.4 |
| atp-dependent rna helicase srmb | SAMEA3710568_01929 | Not Available | Negative | 1868614 - 1869948 | 49881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





