Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-specific channel-forming protein tsx | SAMEA3710568_01876 | Not Available | Positive | 1813697 - 1814581 | 33590.6 |
| putative restriction endonuclease | SAMEA3710568_01877 | Not Available | Negative | 1814758 - 1815105 | 13364.7 |
| preprotein translocase subunit secf | SAMEA3710568_01878 | Not Available | Negative | 1815234 - 1816205 | 35414.6 |
| preprotein translocase subunit secd | SAMEA3710568_01879 | Not Available | Negative | 1816216 - 1818030 | 65171.4 |
| preprotein translocase subunit yajc | SAMEA3710568_01880 | Not Available | Negative | 1818091 - 1818423 | 11887.9 |
| queuine trna-ribosyltransferase | SAMEA3710568_01881 | Not Available | Negative | 1818446 - 1819573 | 42610.2 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMEA3710568_01882 | Not Available | Negative | 1819628 - 1820698 | 39433.0 |
| acyl carrier protein phosphodiesterase | SAMEA3710568_01883 | Not Available | Positive | 1820933 - 1821364 | 17418.6 |
| maltodextrin glucosidase | SAMEA3710568_01884 | Not Available | Negative | 1821369 - 1823186 | 69185.9 |
| putative proline-specific permease | SAMEA3710568_01885 | Not Available | Negative | 1823342 - 1824715 | 50145.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





