Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMEA3710568_01846 | Not Available | Positive | 1778170 - 1779021 | 30955.2 |
| ribose-phosphate pyrophosphokinase | SAMEA3710568_01847 | Not Available | Positive | 1779106 - 1780119 | 36621.4 |
| putative sulfate transporter ychm | SAMEA3710568_01848 | Not Available | Positive | 1780271 - 1781923 | 58416.6 |
| inner membrane protein | SAMEA3710568_01849 | Not Available | Negative | 1781978 - 1782256 | 10486.9 |
| peptidyl-trna hydrolase | SAMEA3710568_01850 | Not Available | Positive | 1782534 - 1783118 | 21113.6 |
| gtp-dependent nucleic acid-binding protein engd | SAMEA3710568_01851 | Not Available | Positive | 1783235 - 1784326 | 39669.6 |
| putative large exoproteins involved in heme utilization or adhesion | SAMEA3710568_01852 | Not Available | Positive | 1785171 - 1788038 | 99822.7 |
| dna-binding transcriptional regulator dhar | SAMEA3710568_01853 | Not Available | Negative | 1788138 - 1790057 | 70522.9 |
| dihydroxyacetone kinase subunit dhak | SAMEA3710568_01854 | Not Available | Positive | 1790285 - 1791355 | 38269.4 |
| dihydroxyacetone kinase subunit dhal | SAMEA3710568_01855 | Not Available | Positive | 1791366 - 1791998 | 22660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





