Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transport regulator | SAMEA3710568_01835 | Not Available | Negative | 1769767 - 1769997 | 8945.18 |
| calcium/sodium:proton antiporter | SAMEA3710568_01836 | Not Available | Positive | 1770267 - 1771367 | 39172.9 |
| small toxic polypeptide | SAMEA3710568_01838 | Not Available | Positive | 1771772 - 1771879 | 3971.94 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | SAMEA3710568_01839 | Not Available | Negative | 1772028 - 1772882 | 30834.5 |
| putative transcriptional regulator | SAMEA3710568_01840 | Not Available | Negative | 1772918 - 1773727 | 30829.1 |
| putative transcriptional regulator | SAMEA3710568_01841 | Not Available | Negative | 1773731 - 1774123 | 14625.7 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3710568_01842 | Not Available | Negative | 1774120 - 1774953 | 30976.8 |
| peptide chain release factor 1 | SAMEA3710568_01843 | Not Available | Negative | 1774953 - 1776035 | 40519.6 |
| glutamyl-trna reductase | SAMEA3710568_01844 | Not Available | Negative | 1776077 - 1777333 | 46360.6 |
| outer membrane lipoprotein lolb | SAMEA3710568_01845 | Not Available | Positive | 1777547 - 1778170 | 23552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





