Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small toxic polypeptide | SAMEA3710568_01792 | Not Available | Negative | 1727216 - 1727323 | 3882.93 |
| putative transporter protein | SAMEA3710568_01794 | Not Available | Positive | 1727799 - 1729070 | 47334.4 |
| dipeptide transporter atp-binding subunit | SAMEA3710568_01795 | Not Available | Negative | 1729100 - 1730104 | 37548.6 |
| dipeptide transporter atp-binding subunit | SAMEA3710568_01796 | Not Available | Negative | 1730101 - 1731084 | 35846.5 |
| dipeptide transporter | SAMEA3710568_01797 | Not Available | Negative | 1731095 - 1731997 | 32268.4 |
| dipeptide transporter permease dppb | SAMEA3710568_01798 | Not Available | Negative | 1732007 - 1733026 | 37527.5 |
| dipeptide transport protein | SAMEA3710568_01799 | Not Available | Negative | 1733334 - 1734941 | 60314.9 |
| Trna-pro | Not Available | Not Available | Positive | 1735685 - 1735761 | Not Available |
| phosphoethanolamine transferase | SAMEA3710568_01801 | Not Available | Negative | 1735853 - 1737544 | 63822.0 |
| putative permeases of the major facilitator superfamily | SAMEA3710568_01802 | Not Available | Negative | 1737868 - 1739076 | 42920.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





