Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate antiporter | SAMEA3710568_01759 | Not Available | Positive | 1692520 - 1693911 | 50609.6 |
| cryptic adenine deaminase | SAMEA3710568_01760 | Not Available | Negative | 1693957 - 1695723 | 63731.1 |
| inorganic anion transporter, sulfate permease (sulp) family | SAMEA3710568_01761 | Not Available | Positive | 1695898 - 1697232 | 46998.6 |
| protein of uncharacterised function (duf1198) | SAMEA3710568_01762 | Not Available | Positive | 1697285 - 1697737 | 17294.1 |
| putative arabinose efflux permease | SAMEA3710568_01763 | Not Available | Positive | 1697900 - 1699138 | 43628.7 |
| transporter | SAMEA3710568_01764 | Not Available | Negative | 1699179 - 1699472 | 11079.3 |
| luxr family transcriptional regulator | SAMEA3710568_01765 | Not Available | Negative | 1699947 - 1700549 | 22615.6 |
| lysr family transcriptional regulator | SAMEA3710568_01766 | Not Available | Positive | 1700997 - 1701968 | 36070.9 |
| putative ribonuclease | SAMEA3710568_01767 | Not Available | Positive | 1702017 - 1703030 | 37902.6 |
| mfs transporter, metabolite:h+ symporter family protein | SAMEA3710568_01768 | Not Available | Positive | 1703441 - 1704763 | 47196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





