Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase, periplasmic | SAMEA3710568_01707 | Not Available | Positive | 1643936 - 1646203 | 82401.4 |
| transport system permease | SAMEA3710568_01708 | Not Available | Positive | 1646455 - 1647372 | 32511.9 |
| abc transporter quaternary amine uptake (qat) family, permease | SAMEA3710568_01709 | Not Available | Positive | 1647379 - 1648536 | 41204.3 |
| abc transporter quaternary amine uptake (qat) family, atp-binding protein | SAMEA3710568_01710 | Not Available | Positive | 1648529 - 1649455 | 34361.6 |
| abc transporter quaternary amine uptake (qat) family, permease | SAMEA3710568_01711 | Not Available | Positive | 1649460 - 1650191 | 25598.3 |
| uncharacterised protein | SAMEA3710568_01712 | Not Available | Negative | 1650172 - 1650279 | 3642.85 |
| putative transcriptional regulator | SAMEA3710568_01713 | Not Available | Negative | 1650339 - 1650497 | 5953.02 |
| trna modification gtpase trme | SAMEA3710568_01714 | Not Available | Negative | 1651523 - 1652887 | 49251.8 |
| putative inner membrane protein translocase component yidc | SAMEA3710568_01715 | Not Available | Negative | 1652993 - 1654639 | 61557.5 |
| ribonuclease p | SAMEA3710568_01716 | Not Available | Negative | 1654863 - 1655189 | 12466.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





