Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative effector of murein hydrolase lrga | SAMEA3710568_01697 | Not Available | Negative | 1634887 - 1635285 | 14579.6 |
| pp_01619 | SAMEA3710568_01698 | Not Available | Positive | 1635524 - 1636471 | Not Available |
| multidrug resistance outer membrane protein mdtq | SAMEA3710568_01699 | Not Available | Positive | 1637149 - 1637415 | 9883.74 |
| multidrug resistance outer membrane protein mdtq precursor | SAMEA3710568_01700 | Not Available | Positive | 1637497 - 1638585 | 39338.8 |
| acetoin dehydrogenase | SAMEA3710568_01701 | Not Available | Positive | 1638776 - 1639024 | 9064.09 |
| acetoin dehydrogenase | SAMEA3710568_01702 | Not Available | Positive | 1639136 - 1639399 | 9309.17 |
| putative inner membrane protein | SAMEA3710568_01703 | Not Available | Negative | 1639516 - 1640094 | 21422.9 |
| inner membrane protein yohc | SAMEA3710568_01704 | Not Available | Positive | 1640264 - 1640851 | 21722.0 |
| d-alanyl-d-alanine endopeptidase | SAMEA3710568_01705 | Not Available | Positive | 1641064 - 1641957 | 32398.4 |
| d-lactate dehydrogenase | SAMEA3710568_01706 | Not Available | Negative | 1641995 - 1643710 | 64681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





