Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose abc transporter periplasmic galactose-binding protein | SAMEA3710568_01687 | Not Available | Positive | 1625790 - 1626788 | 35714.5 |
| galactose/methyl galaxtoside transporter atp-binding protein | SAMEA3710568_01688 | Not Available | Positive | 1626849 - 1628369 | 56418.8 |
| beta-methylgalactoside transporter inner membrane protein | SAMEA3710568_01689 | Not Available | Positive | 1628385 - 1629395 | 35566.4 |
| dihydropyrimidine dehydrogenase | SAMEA3710568_01690 | Not Available | Negative | 1629431 - 1630300 | 31192.8 |
| dihydropyrimidine dehydrogenase | SAMEA3710568_01691 | Not Available | Negative | 1630276 - 1630644 | 13814.5 |
| putative oxidoreductase | SAMEA3710568_01692 | Not Available | Negative | 1630638 - 1631876 | 44411.2 |
| protein of uncharacterised function (duf2542) | SAMEA3710568_01693 | Not Available | Negative | 1632070 - 1632309 | 9264.61 |
| protein sana | SAMEA3710568_01694 | Not Available | Negative | 1632312 - 1633031 | 27288.5 |
| cytidine deaminase | SAMEA3710568_01695 | Not Available | Negative | 1633181 - 1634065 | 31541.6 |
| inner membrane protein yohk | SAMEA3710568_01696 | Not Available | Negative | 1634195 - 1634890 | 24471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





