Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein a | SAMEA3710568_01594 | Not Available | Negative | 1535568 - 1536197 | 23097.7 |
| transcriptional repressor mpra | SAMEA3710568_01595 | Not Available | Negative | 1536324 - 1536854 | 20563.7 |
| inner membrane protein | SAMEA3710568_01596 | Not Available | Negative | 1536945 - 1537280 | 11996.2 |
| transporter, branched chain amino acid exporter (liv-e) family | SAMEA3710568_01597 | Not Available | Negative | 1537270 - 1538007 | 26081.1 |
| major facilitator superfamily permease | SAMEA3710568_01598 | Not Available | Negative | 1538351 - 1539310 | 33695.7 |
| glycine betaine transporter periplasmic subunit | SAMEA3710568_01599 | Not Available | Negative | 1539502 - 1540494 | 36054.4 |
| glycine betaine transporter membrane protein | SAMEA3710568_01600 | Not Available | Negative | 1540552 - 1541616 | 37622.1 |
| glycine betaine/l-proline transport atp-binding protein | SAMEA3710568_01601 | Not Available | Negative | 1541609 - 1542811 | 44164.6 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3710568_01602 | Not Available | Negative | 1543166 - 1544125 | 36475.1 |
| ribonucleotide-diphosphate reductase subunit alpha | SAMEA3710568_01603 | Not Available | Negative | 1544135 - 1546279 | 80500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





