Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol-6-phosphate dehydrogenase | SAMEA3710568_01573 | Not Available | Negative | 1519475 - 1520254 | 27888.6 |
| pts system glucitol/sorbitol-specific transporter subunit iia | SAMEA3710568_01574 | Not Available | Negative | 1520258 - 1520629 | 13292.8 |
| pts system glucitol/sorbitol-specific transporter subunit iib | SAMEA3710568_01575 | Not Available | Negative | 1520640 - 1521599 | 33324.0 |
| pts system glucitol/sorbitol-specific transporter subunit iic | SAMEA3710568_01576 | Not Available | Negative | 1521763 - 1522158 | 14545.1 |
| membrane-bound lytic murein transglycosylase b | SAMEA3710568_01577 | Not Available | Positive | 1522309 - 1523499 | 44286.0 |
| competence damage-inducible protein a | SAMEA3710568_01578 | Not Available | Positive | 1523644 - 1524141 | 17582.7 |
| recombinase a | SAMEA3710568_01579 | Not Available | Positive | 1524221 - 1525282 | 37975.6 |
| recombination regulator recx | SAMEA3710568_01580 | Not Available | Positive | 1525525 - 1526025 | 19411.1 |
| alanyl-trna synthetase | SAMEA3710568_01581 | Not Available | Positive | 1526153 - 1528783 | 96022.9 |
| carbon storage regulator | SAMEA3710568_01582 | Not Available | Positive | 1529018 - 1529203 | 6856.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





