Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative iron-sulfur protein of hydrogenase 3 | SAMEA3710568_01563 | Not Available | Positive | 1508594 - 1508713 | 4113.99 |
| putative transcriptional regulator | SAMEA3710568_01564 | Not Available | Positive | 1508724 - 1509737 | 36958.5 |
| electron transport protein hydn | SAMEA3710568_01565 | Not Available | Positive | 1509886 - 1510413 | 18987.1 |
| carbamoyltransferase hypf | SAMEA3710568_01566 | Not Available | Positive | 1510566 - 1512818 | 82002.6 |
| nitric oxide reductase | SAMEA3710568_01567 | Not Available | Negative | 1512946 - 1514079 | 41229.9 |
| anaerobic nitric oxide reductase flavorubredoxin | SAMEA3710568_01568 | Not Available | Negative | 1514076 - 1515515 | 54256.1 |
| 2-component transcriptional regulator | SAMEA3710568_01569 | Not Available | Positive | 1515702 - 1517216 | 55246.6 |
| d-arabinose 5-phosphate isomerase | SAMEA3710568_01570 | Not Available | Negative | 1517213 - 1518178 | 34035.5 |
| dna-binding transcriptional repressor srlr | SAMEA3710568_01571 | Not Available | Negative | 1518171 - 1518944 | 28219.7 |
| dna-binding transcriptional activator gutm | SAMEA3710568_01572 | Not Available | Negative | 1519011 - 1519370 | 12959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





