Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | SAMEA3710568_01553 | Not Available | Negative | 1499039 - 1500049 | 35070.5 |
| hydrogenase expression/formation protein hypd | SAMEA3710568_01554 | Not Available | Negative | 1500046 - 1501167 | 41366.7 |
| hydrogenase assembly chaperone | SAMEA3710568_01555 | Not Available | Negative | 1501167 - 1501439 | 9732.58 |
| hydrogenase nickel incorporation protein hypb | SAMEA3710568_01556 | Not Available | Negative | 1501430 - 1502302 | 31596.8 |
| putative zn finger protein hypa/hybf (possibly regulating hydrogenase expression) | SAMEA3710568_01557 | Not Available | Negative | 1502306 - 1502656 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | SAMEA3710568_01558 | Not Available | Positive | 1502868 - 1503329 | 17627.9 |
| formate hydrogenlyase subunit b | SAMEA3710568_01559 | Not Available | Positive | 1503454 - 1504065 | 21874.4 |
| formate hydrogenlyase subunit 3 | SAMEA3710568_01560 | Not Available | Positive | 1504102 - 1505931 | 64268.5 |
| formate hydrogenlyase subunit d | SAMEA3710568_01561 | Not Available | Positive | 1505934 - 1506857 | 33091.5 |
| large subunit of hydrogenase 3 | SAMEA3710568_01562 | Not Available | Positive | 1506875 - 1508584 | 65020.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





