Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine radical enzyme, yjji family | SAMEA3710568_01533 | Not Available | Positive | 1482955 - 1484496 | 57651.8 |
| radical sam domain-containing protein | SAMEA3710568_01534 | Not Available | Positive | 1484468 - 1485331 | 31499.4 |
| putative deoxyribonuclease yjjv | SAMEA3710568_01535 | Not Available | Negative | 1485545 - 1486327 | 29006.9 |
| phospholipase, patatin family | SAMEA3710568_01536 | Not Available | Negative | 1486324 - 1487397 | 39774.0 |
| small integral membrane protein | SAMEA3710568_01537 | Not Available | Negative | 1487519 - 1487680 | 5536.27 |
| hyperosmotically inducible periplasmic protein | SAMEA3710568_01538 | Not Available | Negative | 1487797 - 1488402 | 21065.9 |
| peptide chain release factor 3 | SAMEA3710568_01539 | Not Available | Negative | 1488795 - 1490411 | 60674.9 |
| nucleotidase | SAMEA3710568_01540 | Not Available | Negative | 1490475 - 1491152 | 25267.9 |
| ribosomal-protein-alanine n-acetyltransferase | SAMEA3710568_01541 | Not Available | Negative | 1491167 - 1491613 | 16610.7 |
| dna polymerase iii subunit psi | SAMEA3710568_01542 | Not Available | Negative | 1491582 - 1491995 | 15182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





