Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator nhar | SAMEA3710568_01490 | Not Available | Negative | 1441197 - 1442096 | 34068.1 |
| ph-dependent sodium/proton antiporter | SAMEA3710568_01491 | Not Available | Negative | 1442162 - 1443328 | 41414.4 |
| chaperone protein dnaj | SAMEA3710568_01493 | Not Available | Negative | 1444170 - 1445300 | 41074.7 |
| molecular chaperone dnak | SAMEA3710568_01495 | Not Available | Negative | 1445389 - 1447305 | 69131.0 |
| yaai precursor | SAMEA3710568_01496 | Not Available | Positive | 1447682 - 1448086 | 14510.4 |
| yaaw | SAMEA3710568_01497 | Not Available | Positive | 1448112 - 1448825 | 26710.6 |
| inner membrane protein yaah | SAMEA3710568_01498 | Not Available | Positive | 1448974 - 1449540 | 20072.2 |
| molybdopterin biosynthesis mog protein | SAMEA3710568_01499 | Not Available | Negative | 1449575 - 1450162 | 21223.6 |
| transaldolase b | SAMEA3710568_01500 | Not Available | Negative | 1450277 - 1451230 | 35221.2 |
| amino acid carrier protein | SAMEA3710568_01501 | Not Available | Positive | 1451509 - 1452549 | 37002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





