Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cytr | SAMEA3710568_01460 | Not Available | Negative | 1405909 - 1406934 | 37822.1 |
| primosome assembly protein pria | SAMEA3710568_01461 | Not Available | Negative | 1407090 - 1409288 | 81623.5 |
| 50s ribosomal protein l31 | SAMEA3710568_01462 | Not Available | Positive | 1409491 - 1409703 | 7853.45 |
| putative peptidoglycan peptidase | SAMEA3710568_01463 | Not Available | Negative | 1409764 - 1410372 | 23172.9 |
| transcriptional repressor | SAMEA3710568_01464 | Not Available | Negative | 1410556 - 1410873 | 12141.4 |
| cystathionine gamma-synthase | SAMEA3710568_01465 | Not Available | Positive | 1411150 - 1412310 | 41499.8 |
| bifunctional aspartate kinase ii/homoserine dehydrogenase ii | SAMEA3710568_01466 | Not Available | Positive | 1412313 - 1414745 | 88932.8 |
| 5,10-methylenetetrahydrofolate reductase | SAMEA3710568_01467 | Not Available | Positive | 1415094 - 1415984 | 33104.5 |
| catalase/peroxidase hpi | SAMEA3710568_01468 | Not Available | Positive | 1416313 - 1418493 | 80056.0 |
| putative transporter | SAMEA3710568_01469 | Not Available | Positive | 1418587 - 1419492 | 32798.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





