Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase catalytic subunit | SAMEA3710568_01400 | Not Available | Positive | 1348239 - 1350725 | 92991.9 |
| quinol dehydrogenase periplasmic component | SAMEA3710568_01401 | Not Available | Positive | 1350732 - 1351427 | 24926.1 |
| quinol dehydrogenase membrane component | SAMEA3710568_01402 | Not Available | Positive | 1351414 - 1352277 | 31861.3 |
| citrate reductase cytochrome c-type subunit | SAMEA3710568_01403 | Not Available | Positive | 1352274 - 1352723 | 16297.4 |
| cytochrome c-type protein napc | SAMEA3710568_01404 | Not Available | Positive | 1352733 - 1353335 | 23082.8 |
| cytochrome c biogenesis atp-binding export protein ccma | SAMEA3710568_01405 | Not Available | Positive | 1353354 - 1353971 | 22823.3 |
| heme exporter protein ccmb | SAMEA3710568_01406 | Not Available | Positive | 1353968 - 1354630 | 23620.3 |
| heme exporter protein c | SAMEA3710568_01407 | Not Available | Positive | 1354648 - 1355409 | 28782.0 |
| heme exporter protein d | SAMEA3710568_01408 | Not Available | Positive | 1355406 - 1355615 | 7745.59 |
| cytochrome c-type biogenesis protein ccme | SAMEA3710568_01409 | Not Available | Positive | 1355612 - 1356091 | 17699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





