Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein ada | SAMEA3710568_01390 | Not Available | Positive | 1341202 - 1342266 | 39307.9 |
| alkylated dna repair protein alkb | SAMEA3710568_01391 | Not Available | Positive | 1342266 - 1342916 | 24035.7 |
| multidrug transporter membrane protein/atp-binding component | SAMEA3710568_01392 | Not Available | Positive | 1342992 - 1344635 | 61558.4 |
| malate:quinone oxidoreductase | SAMEA3710568_01393 | Not Available | Positive | 1344853 - 1345002 | 5037.29 |
| malate:quinone oxidoreductase | SAMEA3710568_01394 | Not Available | Positive | 1345111 - 1345449 | 12969.5 |
| malate:quinone oxidoreductase | SAMEA3710568_01395 | Not Available | Positive | 1345446 - 1346477 | 37571.2 |
| ecotin | SAMEA3710568_01396 | Not Available | Negative | 1346599 - 1347087 | 18226.9 |
| uncharacterised protein | SAMEA3710568_01397 | Not Available | Negative | 1347222 - 1347386 | 6191.65 |
| ferredoxin-type protein | SAMEA3710568_01398 | Not Available | Positive | 1347495 - 1347989 | 17999.3 |
| assembly protein for periplasmic nitrate reductase | SAMEA3710568_01399 | Not Available | Positive | 1347979 - 1348242 | 9469.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





