Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-6-phosphate synthase | SAMEA3710568_01379 | Not Available | Positive | 1325974 - 1326291 | 10897.2 |
| large extracellular alpha-helical protein | SAMEA3710568_01380 | Not Available | Positive | 1326728 - 1328290 | 57619.4 |
| alpha-2-macroglobulin domain protein precursor | SAMEA3710568_01381 | Not Available | Positive | 1328493 - 1329008 | 19222.9 |
| predicted secreted protein | SAMEA3710568_01382 | Not Available | Positive | 1329009 - 1330658 | 61523.2 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_01383 | Not Available | Positive | 1330663 - 1331439 | 28291.2 |
| hybrid sensory kinase in two-component regulatory system with rcsb and yojn | SAMEA3710568_01384 | Not Available | Positive | 1331714 - 1334563 | 106545.0 |
| transcriptional regulator rcsb | SAMEA3710568_01385 | Not Available | Negative | 1334763 - 1335413 | 23672.0 |
| phosphotransfer intermediate protein in two-component regulatory system with rcsbc | SAMEA3710568_01386 | Not Available | Negative | 1335430 - 1338102 | 100295.0 |
| outer membrane porin protein c | SAMEA3710568_01388 | Not Available | Positive | 1338840 - 1339961 | 41404.5 |
| thiamine biosynthesis lipoprotein apbe | SAMEA3710568_01389 | Not Available | Positive | 1340073 - 1341128 | 38622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





