Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator sdia | SAMEA3710568_01359 | Not Available | Positive | 1310892 - 1311518 | 24474.4 |
| protein of uncharacterised function (duf2594) | SAMEA3710568_01360 | Not Available | Negative | 1311545 - 1311769 | 8239.04 |
| response regulator | SAMEA3710568_01361 | Not Available | Positive | 1312228 - 1312884 | 23894.1 |
| excinuclease abc subunit c | SAMEA3710568_01362 | Not Available | Positive | 1312881 - 1314713 | 68138.9 |
| phosphatidylglycerophosphate synthetase | SAMEA3710568_01363 | Not Available | Positive | 1314770 - 1315318 | 20729.8 |
| Trna-gly | Not Available | Not Available | Positive | 1315470 - 1315545 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1315600 - 1315673 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1315686 - 1315772 | Not Available |
| preprotein translocase subunit seca | SAMEA3710568_01367 | Not Available | Positive | 1315968 - 1316633 | 25040.5 |
| tyrosine-specific transport protein | SAMEA3710568_01368 | Not Available | Negative | 1316695 - 1317906 | 42821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





