Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flis | SAMEA3710568_01349 | Not Available | Negative | 1302011 - 1302421 | 15024.0 |
| flagellar capping protein | SAMEA3710568_01350 | Not Available | Negative | 1302446 - 1303852 | 48545.1 |
| flagellin | SAMEA3710568_01351 | Not Available | Positive | 1304118 - 1305770 | 56639.7 |
| flagellar biosynthesis sigma factor | SAMEA3710568_01352 | Not Available | Positive | 1305935 - 1306153 | 8046.69 |
| flagellar biosynthesis sigma factor | SAMEA3710568_01353 | Not Available | Positive | 1306169 - 1306654 | 18812.2 |
| flagella biosynthesis protein fliz | SAMEA3710568_01354 | Not Available | Positive | 1306700 - 1307251 | 21558.0 |
| periplasmic glutamine-binding protein | SAMEA3710568_01355 | Not Available | Positive | 1307282 - 1308139 | 30971.1 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMEA3710568_01356 | Not Available | Positive | 1308244 - 1309230 | 35169.4 |
| l-cystine abc transporter permease | SAMEA3710568_01357 | Not Available | Positive | 1309245 - 1309913 | 24802.7 |
| putative amino-acid abc transporter atp-binding protein yecc | SAMEA3710568_01358 | Not Available | Positive | 1309910 - 1310662 | 27643.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





