Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination protein q | SAMEA3710568_01339 | Not Available | Positive | 1293576 - 1293719 | 5228.57 |
| putative outer membrane porin protein c precurser | SAMEA3710568_01340 | Not Available | Negative | 1293894 - 1294976 | 39654.5 |
| transposase, is605 orfb family | SAMEA3710568_01341 | Not Available | Positive | 1296389 - 1297195 | 29771.8 |
| uncharacterised acr, cog2135 | SAMEA3710568_01342 | Not Available | Negative | 1297235 - 1297525 | 10399.3 |
| uncharacterised acr, cog2135 | SAMEA3710568_01343 | Not Available | Negative | 1297513 - 1297905 | 15133.0 |
| sira family protein | SAMEA3710568_01344 | Not Available | Negative | 1298012 - 1298245 | 8639.5 |
| putative inner membrane protein | SAMEA3710568_01345 | Not Available | Negative | 1298242 - 1299447 | 44489.6 |
| lipoprotein | SAMEA3710568_01346 | Not Available | Positive | 1299634 - 1300047 | 14960.0 |
| alpha-amylase | SAMEA3710568_01347 | Not Available | Negative | 1300081 - 1301568 | 56552.2 |
| flagellar protein flit | SAMEA3710568_01348 | Not Available | Negative | 1301646 - 1302011 | 13743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





