Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methylase | SAMEA3710568_01308 | Not Available | Positive | 1271686 - 1273104 | 53555.9 |
| very short patch repair protein | SAMEA3710568_01309 | Not Available | Positive | 1273085 - 1273555 | 18085.8 |
| putative transmembrane subunit | SAMEA3710568_01310 | Not Available | Negative | 1273544 - 1274464 | 32152.9 |
| inner membrane protein yedi | SAMEA3710568_01311 | Not Available | Positive | 1274637 - 1275554 | 32100.7 |
| uncharacterized small protein | SAMEA3710568_01312 | Not Available | Positive | 1275633 - 1275815 | 6664.82 |
| diguanylate cyclase | SAMEA3710568_01313 | Not Available | Positive | 1275986 - 1276153 | 6400.94 |
| diguanylate cyclase | SAMEA3710568_01314 | Not Available | Positive | 1276196 - 1277680 | 56211.6 |
| mannosyl-3-phosphoglycerate phosphatase | SAMEA3710568_01315 | Not Available | Negative | 1277677 - 1278021 | 12858.2 |
| mannosyl-3-phosphoglycerate phosphatase | SAMEA3710568_01316 | Not Available | Negative | 1278085 - 1278492 | 15173.1 |
| protein of uncharacterised function (duf2525) | SAMEA3710568_01318 | Not Available | Negative | 1278790 - 1279017 | 8549.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





