Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component,-like enzyme | SAMEA3710568_01266 | Not Available | Negative | 1226579 - 1228003 | 50691.4 |
| dihydrolipoamide acetyltransferase | SAMEA3710568_01267 | Not Available | Negative | 1228328 - 1230208 | 65849.5 |
| pyruvate dehydrogenase subunit e1 | SAMEA3710568_01268 | Not Available | Negative | 1230223 - 1232886 | 99674.1 |
| transcriptional regulator pdhr | SAMEA3710568_01270 | Not Available | Negative | 1233047 - 1233811 | 29455.3 |
| aromatic amino acid transporter | SAMEA3710568_01271 | Not Available | Positive | 1234355 - 1235725 | 49547.9 |
| regulatory protein ampe | SAMEA3710568_01272 | Not Available | Negative | 1235768 - 1236622 | 32123.9 |
| n-acetyl-anhydromuranmyl-l-alanine amidase | SAMEA3710568_01273 | Not Available | Negative | 1236619 - 1237170 | 20564.2 |
| quinolinate phosphoribosyltransferase | SAMEA3710568_01274 | Not Available | Positive | 1237258 - 1238151 | 32774.0 |
| major pilin subunit | SAMEA3710568_01275 | Not Available | Positive | 1238354 - 1238794 | 15608.6 |
| type ii secretion protein | SAMEA3710568_01276 | Not Available | Positive | 1238804 - 1239601 | 29477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





