Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose dehydrogenase | SAMEA3710568_01256 | Not Available | Positive | 1214846 - 1217236 | 86817.2 |
| multicopper oxidase | SAMEA3710568_01257 | Not Available | Negative | 1217283 - 1218833 | 56586.6 |
| bacterial chaperone lipoprotein (puls_outs) | SAMEA3710568_01258 | Not Available | Positive | 1218999 - 1219346 | 12826.3 |
| spermidine synthase | SAMEA3710568_01259 | Not Available | Positive | 1219452 - 1220318 | 32323.1 |
| s-adenosylmethionine decarboxylase | SAMEA3710568_01260 | Not Available | Positive | 1220334 - 1221128 | 30386.3 |
| uncharacterised protein family (upf0231) | SAMEA3710568_01261 | Not Available | Negative | 1221166 - 1221528 | 13956.3 |
| aconitate hydratase 2 | SAMEA3710568_01262 | Not Available | Negative | 1221703 - 1224300 | 93489.4 |
| protein of uncharacterised function (duf3300) | SAMEA3710568_01263 | Not Available | Positive | 1224655 - 1225563 | 32066.4 |
| uncharacterised protein | SAMEA3710568_01264 | Not Available | Negative | 1225543 - 1225710 | 5848.73 |
| uncharacterised protein | SAMEA3710568_01265 | Not Available | Positive | 1225726 - 1226508 | 30814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





