Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer mating pair stabilization protein trag | SAMEA3710568_01185 | Not Available | Negative | 1162428 - 1165253 | 102994.0 |
| conjugal transfer pilus assembly protein trah | SAMEA3710568_01186 | Not Available | Negative | 1165250 - 1166623 | 50524.6 |
| conjugal transfer protein trbf | SAMEA3710568_01187 | Not Available | Negative | 1166610 - 1167005 | 15173.6 |
| conjugal transfer protein trbj | SAMEA3710568_01188 | Not Available | Negative | 1166983 - 1167270 | 10460.9 |
| conjugal transfer protein trbb | SAMEA3710568_01189 | Not Available | Negative | 1167260 - 1167805 | 20013.2 |
| conjugal transfer pilin chaperone traq | SAMEA3710568_01190 | Not Available | Negative | 1167792 - 1168076 | 10823.3 |
| uncharacterised protein | SAMEA3710568_01191 | Not Available | Positive | 1168157 - 1168492 | 12882.5 |
| conjugal transfer protein trba | SAMEA3710568_01192 | Not Available | Negative | 1168473 - 1168814 | 12521.8 |
| conjugal pilus assembly protein traf | SAMEA3710568_01193 | Not Available | Negative | 1168828 - 1169571 | 27976.6 |
| conjugal transfer protein trbe | SAMEA3710568_01194 | Not Available | Negative | 1169564 - 1169821 | 9674.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





