Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-keto-4-deoxyuronate isomerase | SAMEA3710568_01163 | Not Available | Negative | 1139334 - 1140170 | 31047.1 |
| acetyl-coa acetyltransferase | SAMEA3710568_01164 | Not Available | Negative | 1140457 - 1141638 | 41077.3 |
| serine transporter family protein | SAMEA3710568_01165 | Not Available | Positive | 1142004 - 1143122 | 41234.3 |
| toxin chpb | SAMEA3710568_01166 | Not Available | Negative | 1144239 - 1144571 | 11881.5 |
| antitoxin maze | SAMEA3710568_01167 | Not Available | Negative | 1144573 - 1144830 | 9333.16 |
| caax amino terminal protease self- immunity | SAMEA3710568_01168 | Not Available | Negative | 1144923 - 1145576 | 24308.9 |
| replication protein | SAMEA3710568_01169 | Not Available | Negative | 1146515 - 1147372 | 32719.6 |
| replication protein | SAMEA3710568_01171 | Not Available | Negative | 1147684 - 1147932 | 9006.91 |
| uncharacterised protein | SAMEA3710568_01173 | Not Available | Negative | 1148613 - 1149086 | 17739.2 |
| protein of uncharacterised function (duf2726) | SAMEA3710568_01174 | Not Available | Negative | 1149241 - 1149831 | 22918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





