Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | SAMEA3710568_01120 | Not Available | Positive | 1093760 - 1094416 | 24068.1 |
| l-fuculokinase | SAMEA3710568_01121 | Not Available | Positive | 1094495 - 1095016 | 19688.6 |
| fucose operon protein fucu | SAMEA3710568_01122 | Not Available | Positive | 1095018 - 1095440 | 15546.1 |
| dna-binding transcriptional activator fucr | SAMEA3710568_01123 | Not Available | Positive | 1095498 - 1096229 | 27363.7 |
| putative rna 2'-o-ribose methyltransferase | SAMEA3710568_01124 | Not Available | Negative | 1096273 - 1097373 | 41921.5 |
| protein of uncharacterised function (duf423) | SAMEA3710568_01125 | Not Available | Negative | 1097366 - 1097761 | 14334.0 |
| dna-binding transcriptional activator gcva | SAMEA3710568_01126 | Not Available | Negative | 1097780 - 1098697 | 34437.4 |
| putative lipoprotein | SAMEA3710568_01128 | Not Available | Negative | 1099048 - 1099275 | 8200.76 |
| cysteine sulfinate desulfinase | SAMEA3710568_01129 | Not Available | Positive | 1099467 - 1100672 | 43421.9 |
| cysteine desulfurase, sulfur acceptor subunit csde | SAMEA3710568_01130 | Not Available | Positive | 1100672 - 1101115 | 15926.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





