Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 orf | SAMEA3710568_01110 | Not Available | Positive | 1082470 - 1082850 | 14178.5 |
| is4 orf | SAMEA3710568_01111 | Not Available | Positive | 1082964 - 1083797 | 31648.0 |
| serine transporter family protein | SAMEA3710568_01112 | Not Available | Positive | 1084361 - 1085650 | 46909.2 |
| l-serine ammonia-lyase 2 | SAMEA3710568_01113 | Not Available | Positive | 1085708 - 1087075 | 48725.8 |
| exonuclease ix | SAMEA3710568_01114 | Not Available | Positive | 1087096 - 1087941 | 31570.0 |
| l-1,2-propanediol oxidoreductase | SAMEA3710568_01115 | Not Available | Negative | 1087994 - 1089142 | 40433.6 |
| l-fuculose phosphate aldolase | SAMEA3710568_01116 | Not Available | Negative | 1089170 - 1089817 | 23776.7 |
| l-fucose transporter | SAMEA3710568_01117 | Not Available | Positive | 1090364 - 1091680 | 47593.7 |
| l-fucose isomerase | SAMEA3710568_01118 | Not Available | Positive | 1091713 - 1093488 | 64980.3 |
| l-fuculokinase | SAMEA3710568_01119 | Not Available | Positive | 1093597 - 1093776 | 6513.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





