Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthetase | SAMEA3710568_01090 | Not Available | Positive | 1062083 - 1063126 | 38300.9 |
| protein pnuc | SAMEA3710568_01091 | Not Available | Positive | 1063164 - 1063883 | 26997.8 |
| zinc transporter zitb | SAMEA3710568_01092 | Not Available | Negative | 1063880 - 1064821 | 34809.7 |
| homeobox protein | SAMEA3710568_01093 | Not Available | Negative | 1064935 - 1065315 | 12872.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3710568_01094 | Not Available | Positive | 1065631 - 1066683 | 38025.7 |
| phosphoglyceromutase | SAMEA3710568_01095 | Not Available | Negative | 1066850 - 1067602 | 28557.9 |
| aldose 1-epimerase | SAMEA3710568_01096 | Not Available | Negative | 1067805 - 1068845 | 38192.5 |
| galactokinase | SAMEA3710568_01097 | Not Available | Negative | 1068839 - 1069987 | 41443.5 |
| galactose-1-phosphate uridylyltransferase | SAMEA3710568_01098 | Not Available | Negative | 1069991 - 1071037 | 39571.6 |
| udp-galactose-4-epimerase | SAMEA3710568_01099 | Not Available | Negative | 1071047 - 1072063 | 37254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





