Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin uptake protein tolr | SAMEA3710568_01080 | Not Available | Positive | 1056583 - 1057011 | 15383.9 |
| cell envelope integrity inner membrane protein tola | SAMEA3710568_01081 | Not Available | Positive | 1057076 - 1058317 | 42357.7 |
| translocation protein tolb | SAMEA3710568_01082 | Not Available | Positive | 1058450 - 1059742 | 45958.1 |
| peptidoglycan-associated outer membrane lipoprotein | SAMEA3710568_01083 | Not Available | Positive | 1059777 - 1060298 | 18825.3 |
| tol-pal system protein ybgf | SAMEA3710568_01084 | Not Available | Positive | 1060308 - 1061099 | 28324.0 |
| Trna-lys | Not Available | Not Available | Positive | 1061264 - 1061339 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1061475 - 1061550 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1061553 - 1061628 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1061680 - 1061755 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1061759 - 1061834 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





