Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase subunit alpha | SAMEA3710568_01070 | Not Available | Positive | 1044912 - 1045781 | 29765.3 |
| dna-binding transcriptional repressor mngr | SAMEA3710568_01071 | Not Available | Negative | 1045884 - 1046606 | 28277.0 |
| pts system 2-o-a-mannosyl-d-glycerate specific transporter subunit iiabc | SAMEA3710568_01072 | Not Available | Positive | 1046776 - 1048692 | 67089.9 |
| putative sugar hydrolase | SAMEA3710568_01073 | Not Available | Positive | 1048710 - 1051343 | 100285.0 |
| cytochrome d terminal oxidase, polypeptide subunit i | SAMEA3710568_01074 | Not Available | Positive | 1052192 - 1053760 | 58238.4 |
| cytochrome d ubiquinol oxidase subunit ii | SAMEA3710568_01075 | Not Available | Positive | 1053776 - 1054915 | 42471.6 |
| cyd operon protein ybgt | SAMEA3710568_01076 | Not Available | Positive | 1054930 - 1055043 | 4041.9 |
| cyd operon protein ybge | SAMEA3710568_01077 | Not Available | Positive | 1055043 - 1055336 | 10933.0 |
| acyl-coa thioester hydrolase ybgc | SAMEA3710568_01078 | Not Available | Positive | 1055486 - 1055890 | 15562.9 |
| colicin uptake protein tolq | SAMEA3710568_01079 | Not Available | Positive | 1055887 - 1056579 | 25599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





