Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| receptor | SAMEA3710568_01008 | Not Available | Positive | 976613 - 976972 | 13515.3 |
| overlaps previous orf, probably uses downstream start | SAMEA3710568_01009 | Not Available | Negative | 976975 - 977244 | 10280.4 |
| 16s rrna m(2)g966-methyltransferase | SAMEA3710568_01010 | Not Available | Negative | 977234 - 977830 | 21687.8 |
| cell division protein ftsy | SAMEA3710568_01011 | Not Available | Positive | 977980 - 979476 | 54730.5 |
| cell division protein ftse | SAMEA3710568_01012 | Not Available | Positive | 979479 - 980147 | 24440.8 |
| cell division protein ftsx | SAMEA3710568_01013 | Not Available | Positive | 980140 - 981198 | 38575.9 |
| rna polymerase factor sigma-32 | SAMEA3710568_01014 | Not Available | Positive | 981443 - 982297 | 32479.6 |
| high-affinity amino acid transport system periplasmic binding protein | SAMEA3710568_01015 | Not Available | Positive | 982568 - 983671 | 39078.5 |
| acetyltransferase, gnat family | SAMEA3710568_01016 | Not Available | Negative | 983870 - 984253 | 14545.3 |
| high-affinity leucine-specific transport protein, periplasmic binding protein | SAMEA3710568_01017 | Not Available | Positive | 984677 - 985786 | 39409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





