Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel transporter permease nikb | SAMEA3710568_00998 | Not Available | Negative | 966036 - 966980 | 35280.3 |
| nickel abc transporter periplasmic nickel-binding protein nika | SAMEA3710568_00999 | Not Available | Negative | 966980 - 968554 | 58876.3 |
| holo-(acyl carrier protein) synthase 2 | SAMEA3710568_01000 | Not Available | Negative | 968665 - 969252 | 21796.9 |
| putative transport protein | SAMEA3710568_01001 | Not Available | Negative | 969307 - 970356 | 38466.7 |
| major facilitator superfamily transporter | SAMEA3710568_01002 | Not Available | Positive | 970448 - 971707 | 43812.6 |
| uncharacterised protein | SAMEA3710568_01003 | Not Available | Negative | 971711 - 972268 | 19788.7 |
| inner membrane protein yhhq | SAMEA3710568_01004 | Not Available | Negative | 972341 - 973006 | 25304.3 |
| sulfur transfer protein sira | SAMEA3710568_01005 | Not Available | Positive | 973227 - 973472 | 9095.09 |
| zinc/cadmium/mercury/lead-transporting atpase | SAMEA3710568_01006 | Not Available | Negative | 973574 - 975772 | 76801.3 |
| putative membrane protein yhhn | SAMEA3710568_01007 | Not Available | Negative | 975846 - 976472 | 23791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





