Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3710568_00988 | Not Available | Positive | 955511 - 957133 | 61202.7 |
| auxiliary transport protein, membrane fusion protein (mfp) family | SAMEA3710568_00989 | Not Available | Positive | 957499 - 958566 | 38774.4 |
| abc transporter atp-binding protein | SAMEA3710568_00990 | Not Available | Positive | 958563 - 961298 | 100682.0 |
| transporter | SAMEA3710568_00991 | Not Available | Positive | 961298 - 962422 | 41064.2 |
| uncharacterised protein | SAMEA3710568_00992 | Not Available | Positive | 962481 - 962756 | 10147.5 |
| hicb family protein | SAMEA3710568_00993 | Not Available | Positive | 962753 - 963112 | 13403.0 |
| nickel responsive regulator | SAMEA3710568_00994 | Not Available | Negative | 963232 - 963633 | 15094.7 |
| nickel transporter atp-binding protein nike | SAMEA3710568_00995 | Not Available | Negative | 963639 - 964445 | 29558.2 |
| nickel transporter atp-binding protein nikd | SAMEA3710568_00996 | Not Available | Negative | 964442 - 965206 | 26925.2 |
| nickel transporter permease nikc | SAMEA3710568_00997 | Not Available | Negative | 965206 - 966039 | 30306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





