Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | SAMEA3710568_00958 | Not Available | Positive | 920659 - 921483 | 29880.8 |
| protein yaeh | SAMEA3710568_00959 | Not Available | Positive | 921797 - 922183 | 15097.0 |
| carbohydrate diacid transcriptional activator cdar | SAMEA3710568_00960 | Not Available | Negative | 922272 - 922886 | 23642.7 |
| carbohydrate diacid transcriptional activator cdar | SAMEA3710568_00961 | Not Available | Negative | 922853 - 923428 | 21565.2 |
| serine endoprotease | SAMEA3710568_00962 | Not Available | Negative | 923583 - 925007 | 49384.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3710568_00963 | Not Available | Negative | 925137 - 926654 | 59358.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | SAMEA3710568_00964 | Not Available | Positive | 926738 - 927436 | 24355.4 |
| vitamin b12-binding protein precursor | SAMEA3710568_00965 | Not Available | Positive | 927429 - 928229 | 29381.5 |
| inner membrane protein yicg | SAMEA3710568_00966 | Not Available | Positive | 928267 - 928890 | 22321.3 |
| iron-sulfur cluster insertion protein erpa | SAMEA3710568_00967 | Not Available | Negative | 928937 - 929281 | 12101.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





